{
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  "Package": "TMB",
  "Type": "Package",
  "Title": "Template Model Builder: A General Random Effect Tool Inspired by\n'ADMB'",
  "Version": "1.9.21",
  "Date": "2026-03-22",
  "Authors@R": "c(person(\"Kasper\",\"Kristensen\",role=c(\"aut\",\"cre\",\"cph\"),email=\"kaskr@dtu.dk\"),\nperson(\"Brad\",\"Bell\",role=\"cph\"),\nperson(\"Hans\",\"Skaug\",role=\"ctb\"),\nperson(\"Arni\",\"Magnusson\",role=\"ctb\"),\nperson(\"Casper\",\"Berg\",role=\"ctb\"),\nperson(\"Anders\",\"Nielsen\",role=\"ctb\"),\nperson(\"Martin\",\"Maechler\",role=\"ctb\"),\nperson(\"Theo\",\"Michelot\",role=\"ctb\"),\nperson(\"Mollie\",\"Brooks\",role=\"ctb\"),\nperson(\"Alex\",\"Forrence\",role=\"ctb\"),\nperson(\"Christoffer\",\"Moesgaard Albertsen\",role=\"ctb\"),\nperson(\"Cole\",\"Monnahan\",role=\"ctb\") )",
  "Maintainer": "Kasper Kristensen <kaskr@dtu.dk>",
  "Author": "Kasper Kristensen [aut, cre, cph], Brad Bell [cph], Hans Skaug\n[ctb], Arni Magnusson [ctb], Casper Berg [ctb], Anders Nielsen\n[ctb], Martin Maechler [ctb], Theo Michelot [ctb], Mollie\nBrooks [ctb], Alex Forrence [ctb], Christoffer Moesgaard\nAlbertsen [ctb], Cole Monnahan [ctb]",
  "Copyright": "See the file COPYRIGHTS",
  "Description": "With this tool, a user should be able to quickly implement\ncomplex random effect models through simple C++ templates. The\npackage combines 'CppAD' (C++ automatic differentiation),\n'Eigen' (templated matrix-vector library) and 'CHOLMOD' (sparse\nmatrix routines available from R) to obtain an efficient\nimplementation of the applied Laplace approximation with exact\nderivatives. Key features are: Automatic sparseness detection,\nparallelism through 'BLAS' and parallel user templates.",
  "License": "GPL-2",
  "URL": "https://github.com/kaskr/adcomp/wiki",
  "BugReports": "https://github.com/kaskr/adcomp/issues",
  "RoxygenNote": "7.3.3",
  "Repository": "https://kaskr.r-universe.dev",
  "Date/Publication": "2026-06-09 14:21:52 UTC",
  "RemoteUrl": "https://github.com/kaskr/adcomp",
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    "newton",
    "newtonOption",
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    "oneStepPredict",
    "openmp",
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    "plot.tmbprofile",
    "precompile",
    "print.backtrace",
    "print.checkConsistency",
    "print.sdreport",
    "Rinterface",
    "runExample",
    "runSymbolicAnalysis",
    "sdreport",
    "SR",
    "summary.checkConsistency",
    "summary.sdreport",
    "template",
    "TMB.Version",
    "tmbprofile",
    "tmbroot"
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      "title": "Convert estimates to original list format.",
      "topics": [
        "as.list.sdreport"
      ]
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    {
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      "title": "Benchmark parallel templates",
      "topics": [
        "benchmark",
        "plot.parallelBenchmark"
      ]
    },
    {
      "page": "checkConsistency",
      "title": "Check consistency and Laplace accuracy",
      "topics": [
        "checkConsistency"
      ]
    },
    {
      "page": "compile",
      "title": "Compile a C++ template to DLL suitable for MakeADFun.",
      "topics": [
        "compile"
      ]
    },
    {
      "page": "config",
      "title": "Get or set internal configuration variables",
      "topics": [
        "config"
      ]
    },
    {
      "page": "confint.tmbprofile",
      "title": "Profile based confidence intervals.",
      "topics": [
        "confint.tmbprofile"
      ]
    },
    {
      "page": "dynlib",
      "title": "Add dynlib extension",
      "topics": [
        "dynlib"
      ]
    },
    {
      "page": "FreeADFun",
      "title": "Free memory allocated on the C++ side by 'MakeADFun'.",
      "topics": [
        "FreeADFun"
      ]
    },
    {
      "page": "gdbsource",
      "title": "Source R-script through gdb to get backtrace.",
      "topics": [
        "gdbsource",
        "print.backtrace"
      ]
    },
    {
      "page": "GK",
      "title": "Gauss Kronrod configuration",
      "topics": [
        "GK"
      ]
    },
    {
      "page": "MakeADFun",
      "title": "Construct objective functions with derivatives based on a compiled C++ template.",
      "topics": [
        "MakeADFun"
      ]
    },
    {
      "page": "newton",
      "title": "Generalized newton optimizer.",
      "topics": [
        "newton"
      ]
    },
    {
      "page": "newtonOption",
      "title": "Set newton options for a model object.",
      "topics": [
        "newtonOption"
      ]
    },
    {
      "page": "normalize",
      "title": "Normalize process likelihood using the Laplace approximation.",
      "topics": [
        "normalize"
      ]
    },
    {
      "page": "oneStepPredict",
      "title": "Calculate one-step-ahead (OSA) residuals for a latent variable model.",
      "topics": [
        "oneStepPredict"
      ]
    },
    {
      "page": "openmp",
      "title": "Control number of OpenMP threads used by a TMB model.",
      "topics": [
        "openmp"
      ]
    },
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      "page": "plot.tmbprofile",
      "title": "Plot likelihood profile.",
      "topics": [
        "plot.tmbprofile"
      ]
    },
    {
      "page": "precompile",
      "title": "Precompile the TMB library in order to speed up compilation of templates.",
      "topics": [
        "precompile"
      ]
    },
    {
      "page": "print.checkConsistency",
      "title": "Print output from 'checkConsistency'",
      "topics": [
        "print.checkConsistency"
      ]
    },
    {
      "page": "print.sdreport",
      "title": "Print brief model summary",
      "topics": [
        "print.sdreport"
      ]
    },
    {
      "page": "Rinterface",
      "title": "Create minimal R-code corresponding to a cpp template.",
      "topics": [
        "Rinterface"
      ]
    },
    {
      "page": "runExample",
      "title": "Run one of the test examples.",
      "topics": [
        "runExample"
      ]
    },
    {
      "page": "runSymbolicAnalysis",
      "title": "Run symbolic analysis on sparse Hessian",
      "topics": [
        "runSymbolicAnalysis"
      ]
    },
    {
      "page": "sdreport",
      "title": "General sdreport function.",
      "topics": [
        "sdreport"
      ]
    },
    {
      "page": "SR",
      "title": "Sequential reduction configuration",
      "topics": [
        "SR"
      ]
    },
    {
      "page": "summary.checkConsistency",
      "title": "Summarize output from 'checkConsistency'",
      "topics": [
        "summary.checkConsistency"
      ]
    },
    {
      "page": "summary.sdreport",
      "title": "summary tables of model parameters",
      "topics": [
        "summary.sdreport"
      ]
    },
    {
      "page": "template",
      "title": "Create cpp template to get started.",
      "topics": [
        "template"
      ]
    },
    {
      "page": "TMB.Version",
      "title": "Version information on API and ABI.",
      "topics": [
        "TMB.Version"
      ]
    },
    {
      "page": "tmbprofile",
      "title": "Adaptive likelihood profiling.",
      "topics": [
        "tmbprofile"
      ]
    },
    {
      "page": "tmbroot",
      "title": "Compute likelihood profile confidence intervals of a TMB object by root-finding",
      "topics": [
        "tmbroot"
      ]
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