{
  "_id": "6a13ea83acfb0bcc41d2e0b4",
  "Package": "tmbstan",
  "Type": "Package",
  "Title": "MCMC Sampling from 'TMB' Model Object using 'Stan'",
  "Version": "1.1.0",
  "Date": "2026-03-20",
  "Authors@R": "person(given = \"Kasper\",\nfamily = \"Kristensen\",\nrole = c(\"aut\", \"cre\"),\nemail = \"kaskr@dtu.dk\")",
  "Maintainer": "Kasper Kristensen <kaskr@dtu.dk>",
  "Description": "Enables all 'rstan' functionality for a 'TMB' model\nobject, in particular MCMC sampling and chain visualization.\nSampling can be performed with or without Laplace approximation\nfor the random effects. This is demonstrated in Monnahan &\nKristensen (2018) <DOI:10.1371/journal.pone.0197954>.",
  "VignetteBuilder": "knitr, rmarkdown",
  "License": "GPL (>= 3)",
  "BugReports": "https://github.com/kaskr/tmbstan/issues",
  "NeedsCompilation": "yes",
  "SystemRequirements": "GNU make",
  "RoxygenNote": "7.3.3",
  "Config/pak/sysreqs": "make",
  "Repository": "https://kaskr.r-universe.dev",
  "Date/Publication": "2026-04-25 10:55:49 UTC",
  "RemoteUrl": "https://github.com/kaskr/tmbstan",
  "RemoteRef": "HEAD",
  "RemoteSha": "d2bc9bc25d5a4eebf749a6726161402c7ea653fd",
  "RemoteSubdir": "tmbstan",
  "Packaged": {
    "Date": "2026-05-25 06:13:28 UTC",
    "User": "root"
  },
  "Author": "Kasper Kristensen [aut, cre]",
  "MD5sum": "3a9b238d8dbcc3a148c609e0e6953cc4",
  "_user": "kaskr",
  "_type": "src",
  "_file": "tmbstan_1.1.0.tar.gz",
  "_fileid": "91d70b9a3526549442834c93bce74dc072728e784a1a42415eebd210feb76808",
  "_filesize": 105032,
  "_sha256": "91d70b9a3526549442834c93bce74dc072728e784a1a42415eebd210feb76808",
  "_created": "2026-05-25T06:13:28.000Z",
  "_published": "2026-05-25T06:21:55.715Z",
  "_distro": "noble",
  "_jobs": [
    {
      "job": 77665513211,
      "time": 268,
      "config": "linux-devel-arm64",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "7192736607"
    },
    {
      "job": 77665513234,
      "time": 212,
      "config": "linux-devel-x86_64",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "7192725673"
    },
    {
      "job": 77665513232,
      "time": 256,
      "config": "linux-release-arm64",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7192734395"
    },
    {
      "job": 77665513212,
      "time": 260,
      "config": "linux-release-x86_64",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7192735000"
    },
    {
      "job": 77665513182,
      "time": 210,
      "config": "macos-oldrel-arm64",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "7192721400"
    },
    {
      "job": 77665513175,
      "time": 420,
      "config": "macos-oldrel-x86_64",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "7192762098"
    },
    {
      "job": 77665513268,
      "time": 186,
      "config": "macos-release-arm64",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7192717416"
    },
    {
      "job": 77665513185,
      "time": 412,
      "config": "macos-release-x86_64",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7192760517"
    },
    {
      "job": 77664996437,
      "time": 323,
      "config": "source",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7192684679"
    },
    {
      "job": 77665513169,
      "time": 150,
      "config": "wasm-release",
      "r": "4.6.0",
      "check": "FAIL",
      "artifact": ""
    },
    {
      "job": 77665513163,
      "time": 308,
      "config": "windows-devel",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "7192743551"
    },
    {
      "job": 77665513204,
      "time": 263,
      "config": "windows-oldrel",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "7192735594"
    },
    {
      "job": 77665513224,
      "time": 292,
      "config": "windows-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7192740823"
    }
  ],
  "_buildurl": "https://github.com/r-universe/kaskr/actions/runs/26386148332",
  "_status": "success",
  "_host": "GitHub-Actions",
  "_upstream": "https://github.com/kaskr/tmbstan",
  "_commit": {
    "id": "d2bc9bc25d5a4eebf749a6726161402c7ea653fd",
    "author": "Kasper Kristensen <kaskr@dtu.dk>",
    "committer": "Kasper Kristensen <kaskr@dtu.dk>",
    "message": "Add vignette\n",
    "time": 1777114549
  },
  "_maintainer": {
    "name": "Kasper Kristensen",
    "email": "kaskr@dtu.dk",
    "login": "kaskr",
    "description": "",
    "uuid": 5426937
  },
  "_registered": true,
  "_dependencies": [
    {
      "package": "R",
      "version": ">= 4.5.0",
      "role": "Depends"
    },
    {
      "package": "rstan",
      "role": "Depends"
    },
    {
      "package": "StanHeaders",
      "role": "LinkingTo"
    },
    {
      "package": "rstan",
      "role": "LinkingTo"
    },
    {
      "package": "BH",
      "role": "LinkingTo"
    },
    {
      "package": "Rcpp",
      "role": "LinkingTo"
    },
    {
      "package": "RcppEigen",
      "role": "LinkingTo"
    },
    {
      "package": "TMB",
      "role": "LinkingTo"
    },
    {
      "package": "RcppParallel",
      "role": "LinkingTo"
    },
    {
      "package": "methods",
      "role": "Imports"
    },
    {
      "package": "Rcpp",
      "role": "Imports"
    },
    {
      "package": "TMB",
      "role": "Imports"
    },
    {
      "package": "knitr",
      "role": "Suggests"
    },
    {
      "package": "rmarkdown",
      "role": "Suggests"
    },
    {
      "package": "RTMB",
      "role": "Suggests"
    }
  ],
  "_owner": "kaskr",
  "_selfowned": true,
  "_usedby": 2,
  "_updates": [
    {
      "week": "2026-12",
      "n": 7
    },
    {
      "week": "2026-17",
      "n": 1
    }
  ],
  "_tags": [
    {
      "name": "v1.1.0",
      "date": "2026-03-20"
    }
  ],
  "_stars": 33,
  "_contributors": [
    {
      "user": "kaskr",
      "count": 110,
      "uuid": 5426937
    },
    {
      "user": "andrjohns",
      "count": 2,
      "uuid": 27717896
    },
    {
      "user": "colemonnahan",
      "count": 2,
      "uuid": 4804974
    },
    {
      "user": "eddelbuettel",
      "count": 1,
      "uuid": 673121
    }
  ],
  "_userbio": {
    "uuid": 5426937,
    "type": "user",
    "name": "kaskr"
  },
  "_downloads": {
    "count": 867,
    "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/tmbstan"
  },
  "_mentions": 1,
  "_devurl": "https://github.com/kaskr/tmbstan",
  "_searchresults": 262,
  "_topics": [
    "cpp"
  ],
  "_rbuild": "4.6.0",
  "_assets": [
    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/contents.json",
    "extra/NEWS.html",
    "extra/NEWS.txt",
    "extra/readme.html",
    "extra/readme.md",
    "extra/tmbstan.html",
    "manual.pdf"
  ],
  "_homeurl": "https://github.com/kaskr/tmbstan",
  "_realowner": "kaskr",
  "_cranurl": true,
  "_releases": [
    {
      "version": "1.0.0",
      "date": "2017-12-19"
    },
    {
      "version": "1.0.1",
      "date": "2018-11-09"
    },
    {
      "version": "1.0.2",
      "date": "2019-05-18"
    },
    {
      "version": "1.0.3",
      "date": "2021-12-15"
    },
    {
      "version": "1.0.4",
      "date": "2022-03-21"
    },
    {
      "version": "1.0.7",
      "date": "2023-03-24"
    },
    {
      "version": "1.0.9",
      "date": "2023-03-29"
    },
    {
      "version": "1.0.91",
      "date": "2023-08-26"
    },
    {
      "version": "1.1.0",
      "date": "2026-03-20"
    }
  ],
  "_exports": [
    "tmbstan"
  ],
  "_help": [
    {
      "page": "tmbstan",
      "title": "Draw MCMC samples from a TMB model object using Stan",
      "topics": [
        "tmbstan"
      ]
    }
  ],
  "_readme": "https://github.com/kaskr/tmbstan/raw/HEAD/README.md",
  "_rundeps": [
    "abind",
    "backports",
    "BH",
    "callr",
    "checkmate",
    "cli",
    "cpp11",
    "desc",
    "distributional",
    "farver",
    "generics",
    "ggplot2",
    "glue",
    "gridExtra",
    "gtable",
    "inline",
    "isoband",
    "labeling",
    "lattice",
    "lifecycle",
    "loo",
    "magrittr",
    "Matrix",
    "matrixStats",
    "numDeriv",
    "pillar",
    "pkgbuild",
    "pkgconfig",
    "posterior",
    "processx",
    "ps",
    "QuickJSR",
    "R6",
    "RColorBrewer",
    "Rcpp",
    "RcppEigen",
    "RcppParallel",
    "rlang",
    "rstan",
    "S7",
    "scales",
    "StanHeaders",
    "tensorA",
    "tibble",
    "TMB",
    "utf8",
    "vctrs",
    "viridisLite",
    "withr"
  ],
  "_sysdeps": [
    {
      "shlib": "libstdc++",
      "package": "libstdc++6",
      "source": "gcc",
      "version": "14.2.0-4ubuntu2~24.04.1",
      "name": "c++",
      "homepage": "http://gcc.gnu.org/",
      "description": "GNU Standard C++ Library v3"
    }
  ],
  "_vignettes": [
    {
      "source": "tmbstan.rmd",
      "filename": "tmbstan.html",
      "title": "Sampling from TMB models using Stan",
      "author": "Kasper Kristensen",
      "engine": "knitr::rmarkdown",
      "headings": [
        "How to sample",
        "Improving sampling speed"
      ],
      "created": "2026-04-25 10:55:49",
      "modified": "2026-04-25 10:55:49",
      "commits": 1
    }
  ],
  "_score": 8.19208773630094,
  "_indexed": true,
  "_nocasepkg": "tmbstan",
  "_universes": [
    "kaskr"
  ],
  "_binaries": [
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "1.1.0",
      "date": "2026-05-25T06:16:57.000Z",
      "distro": "noble",
      "arch": "aarch64",
      "commit": "d2bc9bc25d5a4eebf749a6726161402c7ea653fd",
      "fileid": "af3920881b86d3dbae609ef3351d6bb3a63c45032cf47661369fa73cb1e98ea0",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/kaskr/actions/runs/26386148332"
    },
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "1.1.0",
      "date": "2026-05-25T06:16:38.000Z",
      "distro": "noble",
      "arch": "x86_64",
      "commit": "d2bc9bc25d5a4eebf749a6726161402c7ea653fd",
      "fileid": "76319a3835486a6fb0c6d280d47232219fb10a81ae7fc35338189d790098c94c",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/kaskr/actions/runs/26386148332"
    },
    {
      "r": "4.6.0",
      "os": "linux",
      "version": "1.1.0",
      "date": "2026-05-25T06:16:56.000Z",
      "distro": "noble",
      "arch": "aarch64",
      "commit": "d2bc9bc25d5a4eebf749a6726161402c7ea653fd",
      "fileid": "20929427b0f13b141dc081e83fedee1ea04b7d1eb4ab69a7b89b1bbe2cd86c89",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/kaskr/actions/runs/26386148332"
    },
    {
      "r": "4.6.0",
      "os": "linux",
      "version": "1.1.0",
      "date": "2026-05-25T06:16:47.000Z",
      "distro": "noble",
      "arch": "x86_64",
      "commit": "d2bc9bc25d5a4eebf749a6726161402c7ea653fd",
      "fileid": "fd1a754ba9fd826e0ec3d9b75aeaa3437995775878927002f301b3475d600b99",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/kaskr/actions/runs/26386148332"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "1.1.0",
      "date": "2026-05-25T06:16:18.000Z",
      "arch": "aarch64",
      "commit": "d2bc9bc25d5a4eebf749a6726161402c7ea653fd",
      "fileid": "9550706bc4e3c414c21aac59dec37479b049ab4486689c97dacdc9ec68660d48",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/kaskr/actions/runs/26386148332"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "1.1.0",
      "date": "2026-05-25T06:18:06.000Z",
      "arch": "x86_64",
      "commit": "d2bc9bc25d5a4eebf749a6726161402c7ea653fd",
      "fileid": "b1747f5c0a7cbfcd3efadad54906aaa83d3834117bf20d184211cc9cd5437e79",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/kaskr/actions/runs/26386148332"
    },
    {
      "r": "4.6.0",
      "os": "mac",
      "version": "1.1.0",
      "date": "2026-05-25T06:16:06.000Z",
      "arch": "aarch64",
      "commit": "d2bc9bc25d5a4eebf749a6726161402c7ea653fd",
      "fileid": "58d58cd87a74b0776f5bffcc4116b959b1ecb34c4c9e47c4cfa2ea16cb3aeb19",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/kaskr/actions/runs/26386148332"
    },
    {
      "r": "4.6.0",
      "os": "mac",
      "version": "1.1.0",
      "date": "2026-05-25T06:17:40.000Z",
      "arch": "x86_64",
      "commit": "d2bc9bc25d5a4eebf749a6726161402c7ea653fd",
      "fileid": "a72479b73ec1e5fae84546da369f446390875c3452b07e77d8669ccb6e8b51d7",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/kaskr/actions/runs/26386148332"
    },
    {
      "r": "4.7.0",
      "os": "win",
      "version": "1.1.0",
      "date": "2026-05-25T06:16:39.000Z",
      "arch": "x86_64",
      "commit": "d2bc9bc25d5a4eebf749a6726161402c7ea653fd",
      "fileid": "191310ae5e04c2c2be277a2fbe4948c7288fdcee8eaefeeb956763f69d290df5",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/kaskr/actions/runs/26386148332"
    },
    {
      "r": "4.5.3",
      "os": "win",
      "version": "1.1.0",
      "date": "2026-05-25T06:15:48.000Z",
      "arch": "x86_64",
      "commit": "d2bc9bc25d5a4eebf749a6726161402c7ea653fd",
      "fileid": "ec59d9db2ad40a31efd50d05fac1f9c3262384e94ae502db0354e5cd8b623976",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/kaskr/actions/runs/26386148332"
    },
    {
      "r": "4.6.0",
      "os": "win",
      "version": "1.1.0",
      "date": "2026-05-25T06:16:12.000Z",
      "arch": "x86_64",
      "commit": "d2bc9bc25d5a4eebf749a6726161402c7ea653fd",
      "fileid": "08b6a64a0346d0526233ab77c8f87429e5ac55bd663407345c089d6fcc0e8c22",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/kaskr/actions/runs/26386148332"
    }
  ]
}