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RTMB tips
24 days ago
requirements for RTMB functions | if transitioning from TMB | more general points | Which standard operations are available in RTMB?
RTMB 2.0
Ben Bolker
RTMB-tips.rmd
Sampling from TMB models using Stan
6 months ago
How to sample | Improving sampling speed
tmbstan 1.2.1
Kasper Kristensen
tmbstan.rmd
Details behind the AD Tape
7 months ago
The AD Tape | MakeADFun vs MakeTape | Creating our first tape | Evaluating derivatives | The operator graph | Reusing tapes | Atomic functions | Tape simplification | Sparse Jacobians | Tape configuration | Atomic matrix multiply | Vectorized operations | Nested tapes | Laplace approximation | Newton solver | Saddle point approximation | Complex numbers and AD
RTMB 2.0
Kasper Kristensen
RTMB-advanced.rmd
Introduction to RTMB
1 years ago
Introduction | Random regression | Loading the package | Getting the data | Defining a model | Implementing the model in RTMB | Fitting the model | Calculating model output | Simulating from the model object | Checking correctness of the implementation using simulation | Goodness-of-fit using quantile residuals | Debugging | Probabilistic syntax | Using an explicit data argument | Model predictions | Prediction task 1 | Prediction task 2
RTMB 2.0
Kasper Kristensen
RTMB-introduction.rmd